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  • Frederic Delsuc

A major update of our OrthoMaM database of orthologous mammalian markers

Updated: Jan 22


We just published an updated version our OrthoMaM database of mammalian orthologs in Molecular Biology and Evolution (doi:10.1093/molbev/msz015). The new OMM v10 version more than doubles the number of species for which curated alignments of CDSs and exons and associated ML trees could be downloaded. It now includes alignments and ML trees of 14,509 CDSs and 6888 exons for 116 mammal species and can be accessed through a completely revamped web interface:

http://www.orthomam.univ-montp2.fr/orthomam_v10/.

OMMv10 is used in the ConvergeAnt project to perform genome-wide scans of convergent substitutions.

#Publication #Collaboration #Bioinformatics

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Institut des Sciences de l'Evolution
UMR 5554 CNRS, IRD, EPHE, Université de Montpellier
Place Eugène Bataillon, 34095 Montpellier Cedex 5, France

©2017 by Frédéric Delsuc.